| Thimphu |
| Public universities |
| Royal University of Bhutan | [Site web 1] [Site web 2] | Thimphu | |
| College of Science and Technology | [Site web] | | |
| Faculty of Information Technology | | | |
| Faculty of Civil Engineering | | | |
| Faculty of Electrical Engineering | | | |
| Faculty of Science and Humanities | | | |
| Faculty of Electronics and Communication | | | |
| Gaeddu College of Business Studies | [Site web] | | |
| Departament of Business Administration | | | |
| Departament of Commerce | | | |
| National Institute of Traditional Medicine | [Site web] | | |
| Institute of Language and Culture Studies | [Site web] | | |
| Sherubtse College | [Site web] | | |
| Departament of Computer Science & Mathematics | | | |
| Departament of English | | | |
| Departament of Geography & Planning | | | |
| Departament of Botany | | | |
| Departament of Environmental Studies | | | |
| Departament of Economics | | | |
| Departament of History | | | |
| Departament of Chemistry | | | |
| Departament of Physics | | | |
| Departament of Zoology | | | |
| Departament of Political Science | | | |
| Paro College of Education | [Site web] | | Paro, Bhutan |
| Department of English | | | |
| Department of Dzongkha | | | |
| Department of Arts and Humanities | | | |
| Department of Professional Studies | | | |
| Department of Science (Biology, Chemistry, Physics) | | | |
| Department of Information Technology | | | |
| Department of Health & Physical Education | | | |
| Department of Mathematics | | | |
| Samtse College of Education | [Site web] | | |
| Department of English | | | |
| Department of Dzongkha | | | |
| Department of Professional Studies | | | |
| Department of Education Psychology | | | |
| Department of Science (Physics, Chemistry and Biology) | | | |
| Department of Mathematics & IT | | | |
| Department of Social Science | | | |
| Royal Institute of Health Sciences | [Site web] | | Thimphu |
| College of Natural Resources | [Site web] | | |
| Faculty of Forestry | | | |
| Faculty of Agriculture | | | |
| Faculty of Extension and Communication | | | |
| Faculty of Animal Husbandry | | | |
| Jigme Namgyel Polytechnic | [Site web] | | |
| Royal Institute of Management | [Site web] | | Simtokha, Thimphu:Bhutan |
| Department of Management Development (DMD) | | | |
| Department of Finance and Business (DFB) | | | |
| Department of Information and Communications Technology (DICT) | | | |
| Department of Research & Consultancy (DRC) | | | |